Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc80Q9D0F1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Gm45417-201ENSMUST00000209533 758 ntBASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
Ndc80Q9D0F1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ndc80Q9D0F1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ndc80Q9D0F1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ndc80Q9D0F1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ndc80Q9D0F1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ndc80Q9D0F1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
Ndc80Q9D0F1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ndc80Q9D0F1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ndc80Q9D0F1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Gm8493-201ENSMUST00000196881 489 ntBASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 AA386476-201ENSMUST00000098781 1665 ntBASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc80Q9D0F1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc80Q9D0F1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Gm43173-201ENSMUST00000202246 593 ntBASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Gm6139-201ENSMUST00000079261 882 ntBASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
Ndc80Q9D0F1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms