Protein–RNA interactions for Protein: Q9D0B8

Ribc1, RIB43A-like with coiled-coils protein 1, mousemouse

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ribc1Q9D0B8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.3■■□□□ 1
Ribc1Q9D0B8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ribc1Q9D0B8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ribc1Q9D0B8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ribc1Q9D0B8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ribc1Q9D0B8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ribc1Q9D0B8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ribc1Q9D0B8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ribc1Q9D0B8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ribc1Q9D0B8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ribc1Q9D0B8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ribc1Q9D0B8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ribc1Q9D0B8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ribc1Q9D0B8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ribc1Q9D0B8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ribc1Q9D0B8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ribc1Q9D0B8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Ribc1Q9D0B8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ribc1Q9D0B8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ribc1Q9D0B8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ribc1Q9D0B8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ribc1Q9D0B8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ribc1Q9D0B8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.26■□□□□ 0.99
Ribc1Q9D0B8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ribc1Q9D0B8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ribc1Q9D0B8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ribc1Q9D0B8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ribc1Q9D0B8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Gm11421-201ENSMUST00000122124 294 ntBASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Ribc1Q9D0B8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ribc1Q9D0B8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Gm43017-201ENSMUST00000198296 752 ntBASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ribc1Q9D0B8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ribc1Q9D0B8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ribc1Q9D0B8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ribc1Q9D0B8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms