Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mms19Q9D071 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Mms19Q9D071 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mms19Q9D071 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.6■□□□□ 0.89
Mms19Q9D071 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Mms19Q9D071 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Mms19Q9D071 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mms19Q9D071 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.59■□□□□ 0.89
Mms19Q9D071 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.59■□□□□ 0.89
Mms19Q9D071 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mms19Q9D071 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mms19Q9D071 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mms19Q9D071 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.58■□□□□ 0.89
Mms19Q9D071 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mms19Q9D071 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mms19Q9D071 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mms19Q9D071 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mms19Q9D071 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Mms19Q9D071 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.58■□□□□ 0.88
Mms19Q9D071 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Mms19Q9D071 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mms19Q9D071 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Mms19Q9D071 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mms19Q9D071 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mms19Q9D071 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mms19Q9D071 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mms19Q9D071 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.57■□□□□ 0.88
Mms19Q9D071 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mms19Q9D071 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.56■□□□□ 0.88
Mms19Q9D071 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Mms19Q9D071 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.56■□□□□ 0.88
Mms19Q9D071 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mms19Q9D071 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Mms19Q9D071 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.55■□□□□ 0.88
Mms19Q9D071 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mms19Q9D071 Gm27801-201ENSMUST00000184174 223 ntBASIC20.55■□□□□ 0.88
Mms19Q9D071 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Mms19Q9D071 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mms19Q9D071 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mms19Q9D071 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mms19Q9D071 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mms19Q9D071 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.55■□□□□ 0.88
Mms19Q9D071 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mms19Q9D071 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mms19Q9D071 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mms19Q9D071 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
Mms19Q9D071 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mms19Q9D071 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mms19Q9D071 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Mms19Q9D071 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.53■□□□□ 0.88
Mms19Q9D071 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.53■□□□□ 0.88
Mms19Q9D071 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.53■□□□□ 0.88
Mms19Q9D071 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.53■□□□□ 0.88
Mms19Q9D071 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mms19Q9D071 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Mms19Q9D071 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mms19Q9D071 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mms19Q9D071 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mms19Q9D071 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.52■□□□□ 0.88
Mms19Q9D071 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mms19Q9D071 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.52■□□□□ 0.87
Mms19Q9D071 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mms19Q9D071 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mms19Q9D071 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mms19Q9D071 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mms19Q9D071 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Mms19Q9D071 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mms19Q9D071 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.51■□□□□ 0.87
Mms19Q9D071 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Mms19Q9D071 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.51■□□□□ 0.87
Mms19Q9D071 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mms19Q9D071 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Mms19Q9D071 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms