Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rnf135Q9CWS1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Rnf135Q9CWS1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf135Q9CWS1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.02■□□□□ 0.79
Rnf135Q9CWS1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf135Q9CWS1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf135Q9CWS1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rnf135Q9CWS1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Gm18284-201ENSMUST00000172604 624 ntBASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Rnf135Q9CWS1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Gm6139-201ENSMUST00000079261 882 ntBASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Rnf135Q9CWS1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf135Q9CWS1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Gm43137-201ENSMUST00000198052 594 ntBASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rnf135Q9CWS1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.95■□□□□ 0.78
Rnf135Q9CWS1 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms