Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn4rQ99PI8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn4rQ99PI8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Gm18284-201ENSMUST00000172604 624 ntBASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn4rQ99PI8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn4rQ99PI8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn4rQ99PI8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn4rQ99PI8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.96■□□□□ 0.3
Rtn4rQ99PI8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rtn4rQ99PI8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rtn4rQ99PI8 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.96■□□□□ 0.3
Rtn4rQ99PI8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Gm27801-201ENSMUST00000184174 223 ntBASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn4rQ99PI8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtn4rQ99PI8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtn4rQ99PI8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtn4rQ99PI8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.94■□□□□ 0.3
Rtn4rQ99PI8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms