Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2ird2Q99NI3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2ird2Q99NI3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gtf2ird2Q99NI3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2ird2Q99NI3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gtf2ird2Q99NI3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gtf2ird2Q99NI3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Gtf2ird2Q99NI3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2ird2Q99NI3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Gm10033-202ENSMUST00000211874 928 ntBASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2ird2Q99NI3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms