Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubqln4Q99NB8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Gm11421-201ENSMUST00000122124 294 ntBASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubqln4Q99NB8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ubqln4Q99NB8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubqln4Q99NB8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubqln4Q99NB8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Ubqln4Q99NB8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.45■□□□□ 0.38
Ubqln4Q99NB8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubqln4Q99NB8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Gm26833-201ENSMUST00000180899 440 ntBASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubqln4Q99NB8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ubqln4Q99NB8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.41■□□□□ 0.38
Ubqln4Q99NB8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms