Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkx6-1Q99MA9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-1Q99MA9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-1Q99MA9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-1Q99MA9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-1Q99MA9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-1Q99MA9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Gm12896-201ENSMUST00000118430 226 ntBASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-1Q99MA9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Gm6576-201ENSMUST00000169678 883 ntBASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx6-1Q99MA9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-1Q99MA9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-1Q99MA9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-1Q99MA9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Nkx6-1Q99MA9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.04■□□□□ 0.48
Nkx6-1Q99MA9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms