Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1dQ99246 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.24■□□□□ 0.67
Cacna1dQ99246 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1dQ99246 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1dQ99246 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Gm12441-201ENSMUST00000121806 588 ntBASIC19.23■□□□□ 0.67
Cacna1dQ99246 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Gm6365-201ENSMUST00000054711 744 ntBASIC19.23■□□□□ 0.67
Cacna1dQ99246 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cacna1dQ99246 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.23■□□□□ 0.67
Cacna1dQ99246 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1dQ99246 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1dQ99246 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.21■□□□□ 0.67
Cacna1dQ99246 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1dQ99246 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Cacna1dQ99246 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.2■□□□□ 0.66
Cacna1dQ99246 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1dQ99246 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1dQ99246 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cacna1dQ99246 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1dQ99246 Gm13534-201ENSMUST00000121169 513 ntBASIC19.2■□□□□ 0.66
Cacna1dQ99246 Gm6211-202ENSMUST00000167849 925 ntBASIC19.2■□□□□ 0.66
Cacna1dQ99246 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1dQ99246 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Nespas-201ENSMUST00000143738 1083 ntBASIC19.19■□□□□ 0.66
Cacna1dQ99246 Gm6420-201ENSMUST00000193885 723 ntBASIC19.19■□□□□ 0.66
Cacna1dQ99246 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1dQ99246 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1dQ99246 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.18■□□□□ 0.66
Cacna1dQ99246 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cacna1dQ99246 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1dQ99246 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.18■□□□□ 0.66
Cacna1dQ99246 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.18■□□□□ 0.66
Cacna1dQ99246 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1dQ99246 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.18■□□□□ 0.66
Cacna1dQ99246 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.18■□□□□ 0.66
Cacna1dQ99246 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1dQ99246 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna1dQ99246 Gm7290-201ENSMUST00000104990 617 ntBASIC19.16■□□□□ 0.66
Cacna1dQ99246 Gm12918-201ENSMUST00000120234 636 ntBASIC19.16■□□□□ 0.66
Cacna1dQ99246 Gm15710-201ENSMUST00000121821 636 ntBASIC19.16■□□□□ 0.66
Cacna1dQ99246 Gm5075-201ENSMUST00000196916 622 ntBASIC19.16■□□□□ 0.66
Cacna1dQ99246 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.16■□□□□ 0.66
Cacna1dQ99246 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.16■□□□□ 0.66
Cacna1dQ99246 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1dQ99246 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1dQ99246 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Gm12527-201ENSMUST00000117967 564 ntBASIC19.15■□□□□ 0.66
Cacna1dQ99246 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.15■□□□□ 0.66
Cacna1dQ99246 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.15■□□□□ 0.66
Cacna1dQ99246 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms