Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha1Q91Y21 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha1Q91Y21 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha1Q91Y21 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha1Q91Y21 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha1Q91Y21 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha1Q91Y21 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Reep4-203ENSMUST00000226563 1444 ntBASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha1Q91Y21 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha1Q91Y21 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha1Q91Y21 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha1Q91Y21 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha1Q91Y21 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha1Q91Y21 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha1Q91Y21 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdha1Q91Y21 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdha1Q91Y21 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms