Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.29■□□□□ 0.84
Pcdha11Q91Y19 Reep4-203ENSMUST00000226563 1444 ntBASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Gm42569-201ENSMUST00000200539 472 ntBASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Notumos-201ENSMUST00000151998 2659 ntBASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha11Q91Y19 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Gm26571-201ENSMUST00000181399 666 ntBASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha11Q91Y19 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Gm10033-202ENSMUST00000211874 928 ntBASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha11Q91Y19 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Gm13234-201ENSMUST00000120010 747 ntBASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha11Q91Y19 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdha11Q91Y19 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha11Q91Y19 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Pcdha11Q91Y19 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 AV356131-201ENSMUST00000206201 750 ntBASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha11Q91Y19 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Gm10849-201ENSMUST00000100397 618 ntBASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdha11Q91Y19 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms