Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb1Q91Y08 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb1Q91Y08 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb1Q91Y08 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Iqck-206ENSMUST00000208658 2891 ntBASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb1Q91Y08 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb1Q91Y08 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb1Q91Y08 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb1Q91Y08 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb1Q91Y08 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Pcdhb1Q91Y08 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb1Q91Y08 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb1Q91Y08 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdhb1Q91Y08 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb1Q91Y08 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb1Q91Y08 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms