Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Gm42569-201ENSMUST00000200539 472 ntBASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb20Q91XZ9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb20Q91XZ9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb20Q91XZ9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb20Q91XZ9 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.52■□□□□ 0.55
Pcdhb20Q91XZ9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb20Q91XZ9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhb20Q91XZ9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb20Q91XZ9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Gm10849-201ENSMUST00000100397 618 ntBASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb20Q91XZ9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 AV356131-201ENSMUST00000206201 750 ntBASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb20Q91XZ9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb20Q91XZ9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Gm27405-201ENSMUST00000184201 112 ntBASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb20Q91XZ9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms