Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga4Q91XY4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhga4Q91XY4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhga4Q91XY4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdhga4Q91XY4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga4Q91XY4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga4Q91XY4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga4Q91XY4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Gm40848-201ENSMUST00000221998 324 ntBASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga4Q91XY4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga4Q91XY4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga4Q91XY4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga4Q91XY4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga4Q91XY4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms