Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb2Q91XX7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb2Q91XX7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Gm7417-201ENSMUST00000192950 473 ntBASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb2Q91XX7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb2Q91XX7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb2Q91XX7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb2Q91XX7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb2Q91XX7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms