Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 BC021767-201ENSMUST00000126387 1716 ntBASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab40cQ8VHQ4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab40cQ8VHQ4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rab40cQ8VHQ4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Rab40cQ8VHQ4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Gm43530-201ENSMUST00000195920 274 ntBASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab40cQ8VHQ4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Gm13238-201ENSMUST00000117655 780 ntBASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Gm43566-201ENSMUST00000196851 808 ntBASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rab40cQ8VHQ4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.68■□□□□ 0.1
Rab40cQ8VHQ4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms