Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rprd1aQ8VDS4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rprd1aQ8VDS4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.82■□□□□ 0.76
Rprd1aQ8VDS4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rprd1aQ8VDS4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Gm9988-201ENSMUST00000069786 435 ntBASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Rprd1aQ8VDS4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rprd1aQ8VDS4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rprd1aQ8VDS4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rprd1aQ8VDS4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rprd1aQ8VDS4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rprd1aQ8VDS4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rprd1aQ8VDS4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rprd1aQ8VDS4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.77■□□□□ 0.76
Rprd1aQ8VDS4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rprd1aQ8VDS4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.76■□□□□ 0.75
Rprd1aQ8VDS4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.76■□□□□ 0.75
Rprd1aQ8VDS4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rprd1aQ8VDS4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rprd1aQ8VDS4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rprd1aQ8VDS4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rprd1aQ8VDS4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms