Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Gm37179-201ENSMUST00000194862 823 ntBASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ndc1Q8VCB1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndc1Q8VCB1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.14■□□□□ 0.5
Ndc1Q8VCB1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ndc1Q8VCB1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ndc1Q8VCB1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
Ndc1Q8VCB1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ndc1Q8VCB1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Gm13234-201ENSMUST00000120010 747 ntBASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Ndc1Q8VCB1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndc1Q8VCB1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms