Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacnb1Q8R3Z5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacnb1Q8R3Z5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacnb1Q8R3Z5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Cacnb1Q8R3Z5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cacnb1Q8R3Z5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 Gm26833-201ENSMUST00000180899 440 ntBASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacnb1Q8R3Z5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cacnb1Q8R3Z5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Gm11421-201ENSMUST00000122124 294 ntBASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Arhgef33-209ENSMUST00000225223 714 ntBASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cacnb1Q8R3Z5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cacnb1Q8R3Z5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cacnb1Q8R3Z5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacnb1Q8R3Z5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Gm12813-201ENSMUST00000119615 902 ntBASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.44■■□□□ 1.02
Cacnb1Q8R3Z5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Gm45696-201ENSMUST00000212088 985 ntBASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.43■■□□□ 1.02
Cacnb1Q8R3Z5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacnb1Q8R3Z5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb1Q8R3Z5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb1Q8R3Z5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cacnb1Q8R3Z5 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.41■■□□□ 1.02
Cacnb1Q8R3Z5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.41■■□□□ 1.02
Cacnb1Q8R3Z5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cacnb1Q8R3Z5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms