Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Slf1Q8R3P9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slf1Q8R3P9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slf1Q8R3P9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slf1Q8R3P9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.44■□□□□ 0.7
Slf1Q8R3P9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.44■□□□□ 0.7
Slf1Q8R3P9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slf1Q8R3P9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slf1Q8R3P9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slf1Q8R3P9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slf1Q8R3P9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.42■□□□□ 0.7
Slf1Q8R3P9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slf1Q8R3P9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slf1Q8R3P9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slf1Q8R3P9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slf1Q8R3P9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Slf1Q8R3P9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slf1Q8R3P9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.38■□□□□ 0.69
Slf1Q8R3P9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms