Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Gm12527-201ENSMUST00000117967 564 ntBASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Chmp7Q8R1T1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Gm20760-201ENSMUST00000179197 648 ntBASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chmp7Q8R1T1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Chmp7Q8R1T1 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chmp7Q8R1T1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Gm6802-201ENSMUST00000167843 1983 ntBASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Chmp7Q8R1T1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chmp7Q8R1T1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
Chmp7Q8R1T1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chmp7Q8R1T1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chmp7Q8R1T1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.73■■□□□ 1.55
Chmp7Q8R1T1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Chmp7Q8R1T1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.73■■□□□ 1.55
Chmp7Q8R1T1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chmp7Q8R1T1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Chmp7Q8R1T1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Gm22240-201ENSMUST00000175225 82 ntBASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC24.71■■□□□ 1.55
Chmp7Q8R1T1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms