Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tm6sf2Q8R1J1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tm6sf2Q8R1J1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tm6sf2Q8R1J1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Gm18671-201ENSMUST00000214826 683 ntBASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tm6sf2Q8R1J1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Notumos-201ENSMUST00000151998 2659 ntBASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tm6sf2Q8R1J1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tm6sf2Q8R1J1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
Tm6sf2Q8R1J1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tm6sf2Q8R1J1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Gm26571-201ENSMUST00000181399 666 ntBASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Gm42569-201ENSMUST00000200539 472 ntBASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf2Q8R1J1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.06■□□□□ 0.48
Tm6sf2Q8R1J1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf2Q8R1J1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tm6sf2Q8R1J1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tm6sf2Q8R1J1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms