Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vopp1Q8R1C3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.75■□□□□ 0.91
Vopp1Q8R1C3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Gm7290-201ENSMUST00000104990 617 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Gm12918-201ENSMUST00000120234 636 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Gm15710-201ENSMUST00000121821 636 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Gm10653-202ENSMUST00000139570 835 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Gm5075-201ENSMUST00000196916 622 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vopp1Q8R1C3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.73■□□□□ 0.91
Vopp1Q8R1C3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vopp1Q8R1C3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vopp1Q8R1C3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Gm6211-202ENSMUST00000167849 925 ntBASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vopp1Q8R1C3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vopp1Q8R1C3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
Vopp1Q8R1C3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.69■□□□□ 0.9
Vopp1Q8R1C3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.69■□□□□ 0.9
Vopp1Q8R1C3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.69■□□□□ 0.9
Vopp1Q8R1C3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vopp1Q8R1C3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vopp1Q8R1C3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.67■□□□□ 0.9
Vopp1Q8R1C3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vopp1Q8R1C3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vopp1Q8R1C3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vopp1Q8R1C3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vopp1Q8R1C3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vopp1Q8R1C3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Vopp1Q8R1C3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms