Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Gm43530-201ENSMUST00000195920 274 ntBASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cnot6Q8K3P5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot6Q8K3P5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot6Q8K3P5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot6Q8K3P5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot6Q8K3P5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot6Q8K3P5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnot6Q8K3P5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Rarb-207ENSMUST00000225921 2756 ntBASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnot6Q8K3P5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.82■□□□□ 0.6
Cnot6Q8K3P5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Golgb1-201ENSMUST00000023534 498 ntBASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.81■□□□□ 0.6
Cnot6Q8K3P5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cnot6Q8K3P5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Gm9847-201ENSMUST00000052528 599 ntBASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnot6Q8K3P5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnot6Q8K3P5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms