Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm6Q8CIR4 Gm7860-201ENSMUST00000121190 879 ntBASIC19.46■□□□□ 0.71
Trpm6Q8CIR4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trpm6Q8CIR4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.46■□□□□ 0.71
Trpm6Q8CIR4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm6Q8CIR4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm6Q8CIR4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm6Q8CIR4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.44■□□□□ 0.7
Trpm6Q8CIR4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm6Q8CIR4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trpm6Q8CIR4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.41■□□□□ 0.7
Trpm6Q8CIR4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpm6Q8CIR4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.39■□□□□ 0.7
Trpm6Q8CIR4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trpm6Q8CIR4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Trpm6Q8CIR4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpm6Q8CIR4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Gm20760-201ENSMUST00000179197 648 ntBASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm6Q8CIR4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm6Q8CIR4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms