Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.62■□□□□ 0.73
CopaQ8CIE6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CopaQ8CIE6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Gm10493-201ENSMUST00000097270 612 ntBASIC19.61■□□□□ 0.73
CopaQ8CIE6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CopaQ8CIE6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CopaQ8CIE6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CopaQ8CIE6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopaQ8CIE6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopaQ8CIE6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CopaQ8CIE6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CopaQ8CIE6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CopaQ8CIE6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CopaQ8CIE6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.58■□□□□ 0.72
CopaQ8CIE6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
CopaQ8CIE6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CopaQ8CIE6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CopaQ8CIE6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.57■□□□□ 0.72
CopaQ8CIE6 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.57■□□□□ 0.72
CopaQ8CIE6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CopaQ8CIE6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CopaQ8CIE6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.55■□□□□ 0.72
CopaQ8CIE6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CopaQ8CIE6 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.54■□□□□ 0.72
CopaQ8CIE6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Gm26571-201ENSMUST00000181399 666 ntBASIC19.54■□□□□ 0.72
CopaQ8CIE6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CopaQ8CIE6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
CopaQ8CIE6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CopaQ8CIE6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CopaQ8CIE6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CopaQ8CIE6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CopaQ8CIE6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms