Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pdlim5Q8CI51 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pdlim5Q8CI51 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Serp2-204ENSMUST00000228055 705 ntBASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pdlim5Q8CI51 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim5Q8CI51 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pdlim5Q8CI51 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.67■□□□□ 0.42
Pdlim5Q8CI51 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim5Q8CI51 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim5Q8CI51 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim5Q8CI51 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms