Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rftn2Q8CHX7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rftn2Q8CHX7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Rftn2Q8CHX7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rftn2Q8CHX7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.57■□□□□ 0.88
Rftn2Q8CHX7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rftn2Q8CHX7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Gm29257-201ENSMUST00000186115 639 ntBASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rftn2Q8CHX7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rftn2Q8CHX7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rftn2Q8CHX7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rftn2Q8CHX7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rftn2Q8CHX7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rftn2Q8CHX7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Rftn2Q8CHX7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rftn2Q8CHX7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rftn2Q8CHX7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms