Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcpip1Q8CDG3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcpip1Q8CDG3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcpip1Q8CDG3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vcpip1Q8CDG3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Vcpip1Q8CDG3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.64■□□□□ 0.9
Vcpip1Q8CDG3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vcpip1Q8CDG3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vcpip1Q8CDG3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vcpip1Q8CDG3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Vcpip1Q8CDG3 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vcpip1Q8CDG3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms