Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shisa4Q8CA71 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Gm38205-201ENSMUST00000192243 258 ntBASIC22.61■■□□□ 1.21
Shisa4Q8CA71 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.61■■□□□ 1.21
Shisa4Q8CA71 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Gm42569-201ENSMUST00000200539 472 ntBASIC22.61■■□□□ 1.21
Shisa4Q8CA71 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Shisa4Q8CA71 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Gm10033-202ENSMUST00000211874 928 ntBASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shisa4Q8CA71 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Shisa4Q8CA71 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shisa4Q8CA71 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Gm10849-201ENSMUST00000100397 618 ntBASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Gm37179-201ENSMUST00000194862 823 ntBASIC22.57■■□□□ 1.2
Shisa4Q8CA71 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Shisa4Q8CA71 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Shisa4Q8CA71 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Shisa4Q8CA71 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Shisa4Q8CA71 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shisa4Q8CA71 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Shisa4Q8CA71 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Shisa4Q8CA71 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shisa4Q8CA71 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shisa4Q8CA71 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shisa4Q8CA71 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.54■■□□□ 1.2
Shisa4Q8CA71 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shisa4Q8CA71 Gm7860-201ENSMUST00000121190 879 ntBASIC22.54■■□□□ 1.2
Shisa4Q8CA71 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shisa4Q8CA71 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms