Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uba3Q8C878 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uba3Q8C878 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uba3Q8C878 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Uba3Q8C878 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uba3Q8C878 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Uba3Q8C878 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.33■□□□□ 0.85
Uba3Q8C878 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Uba3Q8C878 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uba3Q8C878 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Uba3Q8C878 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uba3Q8C878 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uba3Q8C878 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Uba3Q8C878 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Uba3Q8C878 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Uba3Q8C878 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.32■□□□□ 0.84
Uba3Q8C878 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uba3Q8C878 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uba3Q8C878 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.32■□□□□ 0.84
Uba3Q8C878 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uba3Q8C878 Gm27801-201ENSMUST00000184174 223 ntBASIC20.32■□□□□ 0.84
Uba3Q8C878 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.32■□□□□ 0.84
Uba3Q8C878 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.32■□□□□ 0.84
Uba3Q8C878 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Uba3Q8C878 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uba3Q8C878 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Uba3Q8C878 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.31■□□□□ 0.84
Uba3Q8C878 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uba3Q8C878 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uba3Q8C878 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uba3Q8C878 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uba3Q8C878 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Uba3Q8C878 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Uba3Q8C878 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Uba3Q8C878 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uba3Q8C878 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Uba3Q8C878 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uba3Q8C878 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.29■□□□□ 0.84
Uba3Q8C878 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.29■□□□□ 0.84
Uba3Q8C878 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.29■□□□□ 0.84
Uba3Q8C878 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.29■□□□□ 0.84
Uba3Q8C878 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Uba3Q8C878 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Uba3Q8C878 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Uba3Q8C878 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uba3Q8C878 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Uba3Q8C878 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Uba3Q8C878 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uba3Q8C878 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Uba3Q8C878 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uba3Q8C878 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Uba3Q8C878 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.27■□□□□ 0.84
Uba3Q8C878 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.27■□□□□ 0.84
Uba3Q8C878 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Uba3Q8C878 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uba3Q8C878 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.27■□□□□ 0.83
Uba3Q8C878 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.26■□□□□ 0.83
Uba3Q8C878 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.26■□□□□ 0.83
Uba3Q8C878 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.26■□□□□ 0.83
Uba3Q8C878 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.26■□□□□ 0.83
Uba3Q8C878 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uba3Q8C878 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Uba3Q8C878 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uba3Q8C878 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Uba3Q8C878 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uba3Q8C878 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uba3Q8C878 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.25■□□□□ 0.83
Uba3Q8C878 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uba3Q8C878 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uba3Q8C878 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.25■□□□□ 0.83
Uba3Q8C878 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uba3Q8C878 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.25■□□□□ 0.83
Uba3Q8C878 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms