Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpc5Q8C7D3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.29■□□□□ 0.68
Pabpc5Q8C7D3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
Pabpc5Q8C7D3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpc5Q8C7D3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpc5Q8C7D3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pabpc5Q8C7D3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pabpc5Q8C7D3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pabpc5Q8C7D3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pabpc5Q8C7D3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
Pabpc5Q8C7D3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc5Q8C7D3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc5Q8C7D3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 322.2 ms