Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Fam78aQ8C552 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Fam78aQ8C552 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 Gm6211-202ENSMUST00000167849 925 ntBASIC20.58■□□□□ 0.89
Fam78aQ8C552 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.58■□□□□ 0.89
Fam78aQ8C552 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Fam78aQ8C552 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Fam78aQ8C552 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fam78aQ8C552 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Fam78aQ8C552 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fam78aQ8C552 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78aQ8C552 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Fam78aQ8C552 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.56■□□□□ 0.88
Fam78aQ8C552 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Fam78aQ8C552 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.56■□□□□ 0.88
Fam78aQ8C552 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fam78aQ8C552 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.56■□□□□ 0.88
Fam78aQ8C552 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.56■□□□□ 0.88
Fam78aQ8C552 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Fam78aQ8C552 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78aQ8C552 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Fam78aQ8C552 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.55■□□□□ 0.88
Fam78aQ8C552 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78aQ8C552 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78aQ8C552 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78aQ8C552 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78aQ8C552 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.54■□□□□ 0.88
Fam78aQ8C552 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78aQ8C552 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Gm20760-201ENSMUST00000179197 648 ntBASIC20.52■□□□□ 0.88
Fam78aQ8C552 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78aQ8C552 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam78aQ8C552 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Fam78aQ8C552 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78aQ8C552 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78aQ8C552 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.5■□□□□ 0.87
Fam78aQ8C552 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78aQ8C552 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms