Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps9d1Q8C190 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps9d1Q8C190 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.98■□□□□ 0.47
Vps9d1Q8C190 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps9d1Q8C190 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps9d1Q8C190 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Gm21956-201ENSMUST00000179946 522 ntBASIC17.95■□□□□ 0.46
Vps9d1Q8C190 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps9d1Q8C190 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
Vps9d1Q8C190 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps9d1Q8C190 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Gm12922-201ENSMUST00000120626 809 ntBASIC17.92■□□□□ 0.46
Vps9d1Q8C190 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms