Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsfm13Q8BXS2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm13241-201ENSMUST00000094493 780 ntBASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsfm13Q8BXS2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsfm13Q8BXS2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsfm13Q8BXS2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 AA386476-201ENSMUST00000098781 1665 ntBASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsfm13Q8BXS2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsfm13Q8BXS2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfsfm13Q8BXS2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Tnfsfm13Q8BXS2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.08■□□□□ 0.33
Tnfsfm13Q8BXS2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfsfm13Q8BXS2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Tnfsfm13Q8BXS2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfsfm13Q8BXS2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm21956-201ENSMUST00000179946 522 ntBASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm43137-201ENSMUST00000198052 594 ntBASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tnfsfm13Q8BXS2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsfm13Q8BXS2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms