Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ubr7Q8BU04 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ubr7Q8BU04 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ubr7Q8BU04 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ubr7Q8BU04 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Ubr7Q8BU04 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ubr7Q8BU04 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr7Q8BU04 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr7Q8BU04 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr7Q8BU04 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.54■□□□□ 0.72
Ubr7Q8BU04 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr7Q8BU04 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr7Q8BU04 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ubr7Q8BU04 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr7Q8BU04 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.52■□□□□ 0.72
Ubr7Q8BU04 Gm13534-201ENSMUST00000121169 513 ntBASIC19.52■□□□□ 0.72
Ubr7Q8BU04 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr7Q8BU04 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ubr7Q8BU04 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Gm7514-201ENSMUST00000209475 934 ntBASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr7Q8BU04 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr7Q8BU04 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Ubr7Q8BU04 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr7Q8BU04 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr7Q8BU04 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr7Q8BU04 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr7Q8BU04 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr7Q8BU04 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ubr7Q8BU04 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms