Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.5■□□□□ 0.87
Rd3Q8BRE0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rd3Q8BRE0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rd3Q8BRE0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rd3Q8BRE0 Nespas-201ENSMUST00000143738 1083 ntBASIC20.49■□□□□ 0.87
Rd3Q8BRE0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rd3Q8BRE0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rd3Q8BRE0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rd3Q8BRE0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rd3Q8BRE0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rd3Q8BRE0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rd3Q8BRE0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rd3Q8BRE0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Rd3Q8BRE0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rd3Q8BRE0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms