Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sfr1Q8BP27 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sfr1Q8BP27 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Gm27801-201ENSMUST00000184174 223 ntBASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sfr1Q8BP27 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sfr1Q8BP27 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sfr1Q8BP27 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sfr1Q8BP27 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sfr1Q8BP27 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.5■□□□□ 0.71
Sfr1Q8BP27 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Sfr1Q8BP27 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sfr1Q8BP27 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sfr1Q8BP27 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sfr1Q8BP27 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sfr1Q8BP27 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sfr1Q8BP27 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sfr1Q8BP27 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sfr1Q8BP27 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sfr1Q8BP27 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Golph3-202ENSMUST00000226517 2359 ntBASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sfr1Q8BP27 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms