Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clrn3Q8BHH8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn3Q8BHH8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 AA386476-201ENSMUST00000098781 1665 ntBASIC18■□□□□ 0.47
Clrn3Q8BHH8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Gm8493-201ENSMUST00000196881 489 ntBASIC18■□□□□ 0.47
Clrn3Q8BHH8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18■□□□□ 0.47
Clrn3Q8BHH8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn3Q8BHH8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Gm12251-201ENSMUST00000117893 792 ntBASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn3Q8BHH8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn3Q8BHH8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn3Q8BHH8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms