Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.98■□□□□ 0.63
Ubp1Q811S7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.98■□□□□ 0.63
Ubp1Q811S7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubp1Q811S7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ubp1Q811S7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubp1Q811S7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubp1Q811S7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubp1Q811S7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubp1Q811S7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ubp1Q811S7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubp1Q811S7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubp1Q811S7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubp1Q811S7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ubp1Q811S7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubp1Q811S7 Golph3-202ENSMUST00000226517 2359 ntBASIC18.9■□□□□ 0.62
Ubp1Q811S7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ubp1Q811S7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubp1Q811S7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ubp1Q811S7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.89■□□□□ 0.61
Ubp1Q811S7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubp1Q811S7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms