Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.38■□□□□ 0.53
Vrk1Q80X41 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Gm38205-201ENSMUST00000192243 258 ntBASIC18.38■□□□□ 0.53
Vrk1Q80X41 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.38■□□□□ 0.53
Vrk1Q80X41 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.37■□□□□ 0.53
Vrk1Q80X41 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.37■□□□□ 0.53
Vrk1Q80X41 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.37■□□□□ 0.53
Vrk1Q80X41 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 AA386476-201ENSMUST00000098781 1665 ntBASIC18.37■□□□□ 0.53
Vrk1Q80X41 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vrk1Q80X41 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.36■□□□□ 0.53
Vrk1Q80X41 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.36■□□□□ 0.53
Vrk1Q80X41 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vrk1Q80X41 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Gm4968-201ENSMUST00000071458 858 ntBASIC18.35■□□□□ 0.53
Vrk1Q80X41 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk1Q80X41 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.34■□□□□ 0.53
Vrk1Q80X41 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk1Q80X41 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vrk1Q80X41 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Vrk1Q80X41 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.33■□□□□ 0.53
Vrk1Q80X41 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vrk1Q80X41 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk1Q80X41 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Gm7290-201ENSMUST00000104990 617 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Vrk1Q80X41 Gm12918-201ENSMUST00000120234 636 ntBASIC18.32■□□□□ 0.52
Vrk1Q80X41 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms