Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38bQ80SY5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.08■□□□□ 0.8
Prpf38bQ80SY5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38bQ80SY5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38bQ80SY5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Prpf38bQ80SY5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38bQ80SY5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf38bQ80SY5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38bQ80SY5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38bQ80SY5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Prpf38bQ80SY5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf38bQ80SY5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38bQ80SY5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38bQ80SY5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms