Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox11Q7M6Y2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox11Q7M6Y2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox11Q7M6Y2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox11Q7M6Y2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.49■□□□□ 0.71
Sox11Q7M6Y2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.49■□□□□ 0.71
Sox11Q7M6Y2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.49■□□□□ 0.71
Sox11Q7M6Y2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox11Q7M6Y2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Gm6365-201ENSMUST00000054711 744 ntBASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Sox11Q7M6Y2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.46■□□□□ 0.71
Sox11Q7M6Y2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Sox11Q7M6Y2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox11Q7M6Y2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox11Q7M6Y2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.45■□□□□ 0.7
Sox11Q7M6Y2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.45■□□□□ 0.7
Sox11Q7M6Y2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox11Q7M6Y2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox11Q7M6Y2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms