Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shc4Q6S5L9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shc4Q6S5L9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shc4Q6S5L9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Shc4Q6S5L9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shc4Q6S5L9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shc4Q6S5L9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shc4Q6S5L9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Shc4Q6S5L9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18■□□□□ 0.47
Shc4Q6S5L9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18■□□□□ 0.47
Shc4Q6S5L9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18■□□□□ 0.47
Shc4Q6S5L9 Spcs1-207ENSMUST00000228767 1008 ntBASIC18■□□□□ 0.47
Shc4Q6S5L9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shc4Q6S5L9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Shc4Q6S5L9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.99■□□□□ 0.47
Shc4Q6S5L9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Shc4Q6S5L9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shc4Q6S5L9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shc4Q6S5L9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Shc4Q6S5L9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.95■□□□□ 0.46
Shc4Q6S5L9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms