Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
Scn10aQ6QIY3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn10aQ6QIY3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Scn10aQ6QIY3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Gm2559-201ENSMUST00000201323 363 ntBASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn10aQ6QIY3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Scn10aQ6QIY3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn10aQ6QIY3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn10aQ6QIY3 Gm10698-201ENSMUST00000182663 604 ntBASIC22.22■■□□□ 1.15
Scn10aQ6QIY3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.22■■□□□ 1.15
Scn10aQ6QIY3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Scn10aQ6QIY3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
Scn10aQ6QIY3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Scn10aQ6QIY3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Gm6576-201ENSMUST00000169678 883 ntBASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn10aQ6QIY3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Scn10aQ6QIY3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Scn10aQ6QIY3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Scn10aQ6QIY3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Scn10aQ6QIY3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scn10aQ6QIY3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
Scn10aQ6QIY3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scn10aQ6QIY3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Scn10aQ6QIY3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Gm11249-201ENSMUST00000117071 859 ntBASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms