Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Abcf1Q6P542 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Abcf1Q6P542 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Abcf1Q6P542 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.5■■□□□ 1.03
Abcf1Q6P542 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Abcf1Q6P542 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Abcf1Q6P542 Gm12821-201ENSMUST00000120022 600 ntBASIC21.49■■□□□ 1.03
Abcf1Q6P542 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Abcf1Q6P542 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Abcf1Q6P542 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.49■■□□□ 1.03
Abcf1Q6P542 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Abcf1Q6P542 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.48■■□□□ 1.03
Abcf1Q6P542 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abcf1Q6P542 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.47■■□□□ 1.03
Abcf1Q6P542 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abcf1Q6P542 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcf1Q6P542 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcf1Q6P542 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcf1Q6P542 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcf1Q6P542 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcf1Q6P542 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abcf1Q6P542 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Abcf1Q6P542 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
Abcf1Q6P542 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Abcf1Q6P542 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abcf1Q6P542 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abcf1Q6P542 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abcf1Q6P542 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.42■■□□□ 1.02
Abcf1Q6P542 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abcf1Q6P542 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcf1Q6P542 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcf1Q6P542 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Abcf1Q6P542 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.41■■□□□ 1.02
Abcf1Q6P542 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcf1Q6P542 Gm15039-201ENSMUST00000118914 875 ntBASIC21.41■■□□□ 1.02
Abcf1Q6P542 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abcf1Q6P542 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Abcf1Q6P542 Gm43530-201ENSMUST00000195920 274 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms