Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm12896-201ENSMUST00000118430 226 ntBASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC30.24■■■□□ 2.43
Slx4Q6P1D7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC30.23■■■□□ 2.43
Slx4Q6P1D7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Slx4Q6P1D7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Slx4Q6P1D7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Slx4Q6P1D7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC30.23■■■□□ 2.43
Slx4Q6P1D7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Slx4Q6P1D7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
Slx4Q6P1D7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC30.22■■■□□ 2.43
Slx4Q6P1D7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC30.22■■■□□ 2.43
Slx4Q6P1D7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Slx4Q6P1D7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Slx4Q6P1D7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
Slx4Q6P1D7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Slx4Q6P1D7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC30.21■■■□□ 2.43
Slx4Q6P1D7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Slx4Q6P1D7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Slx4Q6P1D7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC30.2■■■□□ 2.43
Slx4Q6P1D7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC30.2■■■□□ 2.43
Slx4Q6P1D7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC30.2■■■□□ 2.43
Slx4Q6P1D7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC30.2■■■□□ 2.43
Slx4Q6P1D7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Slx4Q6P1D7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC30.2■■■□□ 2.42
Slx4Q6P1D7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Slx4Q6P1D7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Slx4Q6P1D7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Slx4Q6P1D7 Gm7860-201ENSMUST00000121190 879 ntBASIC30.19■■■□□ 2.42
Slx4Q6P1D7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Slx4Q6P1D7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Slx4Q6P1D7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Slx4Q6P1D7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Slx4Q6P1D7 Gm37035-201ENSMUST00000194809 2148 ntBASIC30.18■■■□□ 2.42
Slx4Q6P1D7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Slx4Q6P1D7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Slx4Q6P1D7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Slx4Q6P1D7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Slx4Q6P1D7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC30.17■■■□□ 2.42
Slx4Q6P1D7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Slx4Q6P1D7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Slx4Q6P1D7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
Slx4Q6P1D7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC30.16■■■□□ 2.42
Slx4Q6P1D7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Slx4Q6P1D7 Gm43909-201ENSMUST00000203443 1876 ntBASIC30.16■■■□□ 2.42
Slx4Q6P1D7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Slx4Q6P1D7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Slx4Q6P1D7 Gm6576-201ENSMUST00000169678 883 ntBASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Gm13509-201ENSMUST00000119733 1308 ntBASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Dio3-201ENSMUST00000097228 1449 ntBASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slx4Q6P1D7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Gm13042-201ENSMUST00000119244 1955 ntBASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Slx4Q6P1D7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Slx4Q6P1D7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Slx4Q6P1D7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
Slx4Q6P1D7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Slx4Q6P1D7 Gm10698-201ENSMUST00000182663 604 ntBASIC30.11■■■□□ 2.41
Slx4Q6P1D7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC30.11■■■□□ 2.41
Slx4Q6P1D7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Slx4Q6P1D7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Slx4Q6P1D7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC30.11■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms