Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Ltn1Q6A009 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ltn1Q6A009 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.23■■□□□ 1.31
Ltn1Q6A009 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ltn1Q6A009 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ltn1Q6A009 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ltn1Q6A009 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ltn1Q6A009 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ltn1Q6A009 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.22■■□□□ 1.31
Ltn1Q6A009 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.22■■□□□ 1.31
Ltn1Q6A009 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ltn1Q6A009 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ltn1Q6A009 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ltn1Q6A009 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.21■■□□□ 1.31
Ltn1Q6A009 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ltn1Q6A009 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ltn1Q6A009 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Ltn1Q6A009 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
Ltn1Q6A009 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ltn1Q6A009 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ltn1Q6A009 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.2■■□□□ 1.3
Ltn1Q6A009 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ltn1Q6A009 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.2■■□□□ 1.3
Ltn1Q6A009 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ltn1Q6A009 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.19■■□□□ 1.3
Ltn1Q6A009 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ltn1Q6A009 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ltn1Q6A009 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ltn1Q6A009 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ltn1Q6A009 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ltn1Q6A009 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.19■■□□□ 1.3
Ltn1Q6A009 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ltn1Q6A009 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.18■■□□□ 1.3
Ltn1Q6A009 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ltn1Q6A009 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.18■■□□□ 1.3
Ltn1Q6A009 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.18■■□□□ 1.3
Ltn1Q6A009 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.17■■□□□ 1.3
Ltn1Q6A009 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ltn1Q6A009 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
Ltn1Q6A009 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ltn1Q6A009 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Ltn1Q6A009 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.14■■□□□ 1.3
Ltn1Q6A009 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Ltn1Q6A009 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ltn1Q6A009 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ltn1Q6A009 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ltn1Q6A009 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.14■■□□□ 1.29
Ltn1Q6A009 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ltn1Q6A009 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ltn1Q6A009 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ltn1Q6A009 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ltn1Q6A009 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.14■■□□□ 1.29
Ltn1Q6A009 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ltn1Q6A009 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ltn1Q6A009 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ltn1Q6A009 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ltn1Q6A009 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ltn1Q6A009 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ltn1Q6A009 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ltn1Q6A009 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ltn1Q6A009 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.12■■□□□ 1.29
Ltn1Q6A009 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ltn1Q6A009 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ltn1Q6A009 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.11■■□□□ 1.29
Ltn1Q6A009 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms