Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.96■□□□□ 0.63
VclQ64727 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VclQ64727 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.96■□□□□ 0.63
VclQ64727 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.96■□□□□ 0.63
VclQ64727 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.96■□□□□ 0.63
VclQ64727 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VclQ64727 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VclQ64727 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VclQ64727 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VclQ64727 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
VclQ64727 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VclQ64727 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.95■□□□□ 0.62
VclQ64727 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.95■□□□□ 0.62
VclQ64727 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VclQ64727 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
VclQ64727 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.94■□□□□ 0.62
VclQ64727 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VclQ64727 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VclQ64727 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
VclQ64727 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VclQ64727 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VclQ64727 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VclQ64727 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VclQ64727 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VclQ64727 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VclQ64727 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.92■□□□□ 0.62
VclQ64727 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.91■□□□□ 0.62
VclQ64727 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.91■□□□□ 0.62
VclQ64727 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.91■□□□□ 0.62
VclQ64727 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.91■□□□□ 0.62
VclQ64727 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.91■□□□□ 0.62
VclQ64727 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VclQ64727 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.9■□□□□ 0.62
VclQ64727 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.9■□□□□ 0.62
VclQ64727 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.9■□□□□ 0.62
VclQ64727 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VclQ64727 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
VclQ64727 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VclQ64727 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VclQ64727 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.89■□□□□ 0.61
VclQ64727 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.89■□□□□ 0.61
VclQ64727 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VclQ64727 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VclQ64727 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VclQ64727 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VclQ64727 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VclQ64727 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.88■□□□□ 0.61
VclQ64727 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
VclQ64727 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
VclQ64727 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VclQ64727 Gm42778-201ENSMUST00000199644 553 ntBASIC18.88■□□□□ 0.61
VclQ64727 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.88■□□□□ 0.61
VclQ64727 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VclQ64727 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms