Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Commd3Q63829 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Commd3Q63829 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Commd3Q63829 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.06■□□□□ 0.16
Commd3Q63829 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Commd3Q63829 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Commd3Q63829 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.05■□□□□ 0.16
Commd3Q63829 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.05■□□□□ 0.16
Commd3Q63829 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Commd3Q63829 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.05■□□□□ 0.16
Commd3Q63829 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Commd3Q63829 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Commd3Q63829 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.04■□□□□ 0.16
Commd3Q63829 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.04■□□□□ 0.16
Commd3Q63829 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Commd3Q63829 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Commd3Q63829 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Commd3Q63829 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Commd3Q63829 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.03■□□□□ 0.16
Commd3Q63829 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.03■□□□□ 0.16
Commd3Q63829 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Commd3Q63829 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Commd3Q63829 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Commd3Q63829 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Commd3Q63829 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Commd3Q63829 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Commd3Q63829 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Commd3Q63829 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Commd3Q63829 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Commd3Q63829 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Commd3Q63829 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Commd3Q63829 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Commd3Q63829 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Commd3Q63829 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Commd3Q63829 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.01■□□□□ 0.15
Commd3Q63829 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Commd3Q63829 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.01■□□□□ 0.15
Commd3Q63829 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.01■□□□□ 0.15
Commd3Q63829 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Commd3Q63829 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Commd3Q63829 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Commd3Q63829 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Commd3Q63829 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Commd3Q63829 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Commd3Q63829 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Commd3Q63829 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Commd3Q63829 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms